Analysis Pipelines

New microRNA Analysis App in BaseSpace

miRNAs are a class of non-coding RNAs mainly involved in post-transcription control of gene expression although they are also involved in other non-canonical functions. Furthermore, they represents an interesting class of biomarkers for a large variety of diseases. Small RNA-sequencing ...

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RNA-Seq Data Preprocessing Tutorial

rna-seq

Check the full description for links to all the resources and the protocol etc. This tutorial follows the Delhomme et al. Epigenesys protocol for RNA sequencing data preprocessing in order to finally perform a differential expression study. To demonstrate, we ...

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Genome-wide profiling of the C. elegans dsRNAome

rna-seq

Recent studies hint that endogenous dsRNA plays an unexpected role in cellular signaling. However, a complete understanding of endogenous dsRNA signaling is hindered by an incomplete annotation of dsRNA-producing genes. To identify dsRNAs expressed in Caenorhabditis elegans, researchers at the ...

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