Don't Miss
  • Single-cell Multi-Omics: Marrying RNA Seq to protein expression and more
  • NASA GeneLab RNA-Seq Consensus Pipeline – Standardized Processing of Short-Read RNA-Seq Data
  • New approach emerges to better classify, treat brain tumors
  • 5th RNA Symposium – “Processing RNA”
  • The biotech company baseclick GmbH launched a new and highly efficient method for SARS-CoV-2 mutation analysis
  • New computational tool reliably differentiates between cancer and normal cells from single-cell RNA-sequencing data
  • RNA sequencing of wastewater useful for control of SARS-CoV-2
  • Poly-A enrichment or rRNA depletion – how library construction influences RNA sequencing data
  • AIR-seq – metabolic RNA labeling for probing RNA dynamics in bacteria
  • Featured RNA-Seq Job – Computational Biology Scientist, Cancer Immunology

RNA-Seq BlogRNA-Seq Blog Transcriptome Research & Industry News

  • Home
  • News
    • Commentary
    • Headlines
    • Industry News
    • Grants / Funding
    • Information
    • Poll Results
    • Press Releases
    • Transcriptome Sequenced
  • Events
    • Conferences
    • Meetings
    • Webinars
    • Workshops
    • Projects
    • Local Events
  • Jobs
  • Technology
    • Methods
      • Workflow
      • RNA Extraction
      • Library Preparation
      • Sequencing Protocols
      • Statistical Analysis
      • Data Analysis
        • Analysis Pipelines
        • Annotation
        • Clouding Platforms
        • Data Normalization
        • Data Sets
        • Data Visualization
        • Databases
        • Expression and Quantification
        • Other Tools
        • Pathway Analysis
        • SNP Detection
        • Splicing and Junction Mapping
        • Statistical Analysis
        • Transcriptome Assembly Tools
        • Unspliced Mapping Tools
    • New Products
      • Our Advertisers
    • Patents
    • Presentations
    • Publications
    • Review Publications
    • Web Tools
  • Data Analysis
    • Analysis Pipelines
    • Annotation
    • Clouding Platforms
    • Data Normalization
    • Data Sets
    • Data Visualization
    • Databases
    • Expression and Quantification
    • Other Tools
    • Pathway Analysis
    • SNP Detection
    • Splicing and Junction Mapping
    • Statistical Analysis
    • Transcriptome Assembly Tools
  • Blog
  • Reader Posts
  • Contact
    • Administration
    • Contribute News
    • Subscribe
    • Advertise
    • Request for RNA-Seq Services

Tag Archives: Partially-Observed Boolean Dynamical System

BoolFilter – an R package for estimation and identification of partially-observed Boolean dynamical systems

November 28, 2017 Leave a comment 2,642 Views

rna-seq

Gene regulatory networks govern the function of key cellular processes, such as control of the cell cycle, response to stress, DNA repair mechanisms, and more. Boolean networks have been used successfully in modeling gene regulatory networks. In the Boolean network ...

Read More »

Stay Connected

RNA-SEQ & COVID-19

Publications Trend

Recent RNA-SEQ Pubs

Cardioprotection of Panax Notoginseng saponins against acute myocardial infarction and heart failure through inducing autophagy.
METTL3 restrains papillary thyroid cancer progression via m6A/c-Rel/IL-8 mediated neutrophils infiltration.
Identify immune-related genes of adzuki bean weevil (Callosobruchus chinensis) in response to bacteria challenge by transcriptome analysis.
Galectin-1-RNA interaction map reveals potential regulatory roles in angiogenesis.
Coconut genome assembly enables evolutionary analysis of palms and highlights signaling pathways involved in salt tolerance.
RNA editing enzyme APOBEC3A promotes pro-inflammatory M1 macrophage polarization.

News in Pictures

The BD AbSeq workflow integrated into the BD Rhapsody system
rna-seq
rna-seq
rna-seq
baseclick
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq

recent visitors

Subscribe to the RNA-Seq Blog


Email Frequency

RNA-Seq Products & Services

Most Shared Posts

  • Bulk and scRNA-Seq reveal SARS-CoV-2 infection of non-neuronal cells, not neurons, may drive loss of smell in patients with COVID-19
    Google +1 logo   Twitter logo   Facebook logo
  • Single-cell RNA sequencing reveals mRNA splice isoform switching during kidney development
    Google +1 logo   Twitter logo   Facebook logo
  • pipeComp – a general framework for the evaluation of computational pipelines, reveals performant single cell RNA-seq preprocessing tools
    Google +1 logo   Twitter logo   Facebook logo
  • UMASS microbiologist receives NIH grant to advance anti-viral strategies
    Google +1 logo   Twitter logo   Facebook logo
  • Dolomite Bio releases new application on plant protoplast RNA sequencing of leaves
    Google +1 logo   Twitter logo   Facebook logo
  • Popular
  • Recent
  • Comments
  • rna-seq

    RPKM, FPKM and TPM, clearly explained

    July 22, 2015
  • rna-seq

    How to Analyze RNA-Seq Data?

    October 10, 2016
  • rna-seq

    Visualization of nucleotide substitutions in the (micro)transcriptome

    August 13, 2014
  • rna-seq

    Life Technologies Releases New Research Tool: Oncomine NGS RNA-Seq Gene Expression Browser

    April 8, 2014
  • rna-seq

    Comparison of TMM (edgeR), RLE (DESeq2), and MRN Normalization Methods

    October 6, 2016
  • The BD AbSeq workflow integrated into the BD Rhapsody system

    Single-cell Multi-Omics: Marrying RNA Seq to protein expression and more

    3 days ago
  • rna-seq

    NASA GeneLab RNA-Seq Consensus Pipeline – Standardized Processing of Short-Read RNA-Seq Data

    3 days ago
  • rna-seq

    New approach emerges to better classify, treat brain tumors

    4 days ago
  • rna-seq

    5th RNA Symposium – “Processing RNA”

    4 days ago
  • baseclick

    The biotech company baseclick GmbH launched a new and highly efficient method for SARS-CoV-2 mutation analysis

    5 days ago
  • Ivan Molineris: If I understood well the annotation "ENSEMBL" used in this p...
  • Aashni: Nice article...
  • rna fixation: Wonderful article! We will be linking to this great article...
  • Protein Fixation: I was Searching Health blog commenting site the time I found...
  • SimPHARM.com: Great post, every thing is describe here very understandable...

Categories

Archives

What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


RNA-Seq

Recent News

  • The BD AbSeq workflow integrated into the BD Rhapsody system

    Single-cell Multi-Omics: Marrying RNA Seq to protein expression and more

    3 days ago
  • rna-seq

    NASA GeneLab RNA-Seq Consensus Pipeline – Standardized Processing of Short-Read RNA-Seq Data

    3 days ago
  • rna-seq

    New approach emerges to better classify, treat brain tumors

    4 days ago
  • rna-seq

    5th RNA Symposium – “Processing RNA”

    4 days ago
  • baseclick

    The biotech company baseclick GmbH launched a new and highly efficient method for SARS-CoV-2 mutation analysis

    5 days ago
  • rna-seq

    New computational tool reliably differentiates between cancer and normal cells from single-cell RNA-sequencing data

    5 days ago
  • rna-seq

    RNA sequencing of wastewater useful for control of SARS-CoV-2

    5 days ago

Subscribe to the RNA-Seq Blog


Email Frequency

Social Networking Pages


RNA-Seq
  • 6,491 Followers
  • 2,079 Fans
© Copyright 2009-2020, All Rights Reserved. | Designed by Go Big - Online Presence Creations