RNA Structure Framework – automatic transcriptome-scale reconstruction of RNA structures from probing data

February 26, 2016 Leave a comment 3,108 Views

The rapidly increasing number of discovered non-coding RNAs makes the understanding of their structure a key feature toward a deeper comprehension of gene expression regulation. Various enzymatic- and chemically- based approaches have been recently developed to allow whole-genome studies of ...

Probing RNA Structure in Cells Using Targeted Structure-Seq

December 11, 2015 Leave a comment 4,108 Views

Models for how lncRNAs function depend on thermodynamically stable secondary and higher-order structures that RNAs can form in the context of a cell. Probing accessible RNA bases can provide data to build models of RNA conformation that provide insight into ...

RNA-Seq Blog Transcriptome Research & Industry News

Tag Archives: Structure-Seq

RNA Structure Framework – automatic transcriptome-scale reconstruction of RNA structures from probing data

Probing RNA Structure in Cells Using Targeted Structure-Seq

Poly-A enrichment or rRNA depletion – how library construction influences RNA sequencing data

AIR-seq – metabolic RNA labeling for probing RNA dynamics in bacteria

Featured RNA-Seq Job – Computational Biology Scientist, Cancer Immunology

Enriching pathogen transcripts from infected samples: a capture based approach to improved host-pathogen RNA-Seq

Associate Professor

Using single-cell RNA sequencing to disentangle the blood system

Arriba – accurate and efficient detection of gene fusions from RNA sequencing data